Installing Mars mesoscale model on spirit

Set up environment

Add this in your ~/.bashrc then source the file

 1 module purge
 2 module load intel/2021.4.0
 3 module load intel-mkl/2020.4.304
 4 module load openmpi/4.0.7
 5 module load hdf5/1.10.7-mpi
 6 module load netcdf-fortran/4.5.3-mpi
 7 module load netcdf-c/4.7.4-mpi
 8 declare -x WHERE_MPI=/net/nfs/tools/u20/22.3/PrgEnv/intel/linux-ubuntu20.04-zen2/openmpi/4.0.7-intel-2021.4.0-43fdcnab3ydwu7ycrplnzlp6xieusuz7/bin/
 9 declare -x NETCDF=/scratchu/spiga/les_mars_project_spirit/netcdf_hacks/SPIRIT
10 declare -x NCDFLIB=$NETCDF/lib
11 declare -x NCDFINC=$NETCDF/include

Set up the installer

Go to your 'data' directory and download the installer with the following command

svn co https://svn.lmd.jussieu.fr/Planeto/trunk/MESOSCALE/LMD_MM_MARS/SIMU

Make sure the installer can be executed

chmod 755 SIMU/meso_install.sh

Make a link (e.g. where you are, in the parent directory of /data) to the main script in this SIMU directory

ln -sf SIMU/meso_install.sh .

Run the installer with a simple display of possible options

./meso_install.sh -h