Difference between revisions of "Installing Titan mesoscale model on spirit"
| (10 intermediate revisions by the same user not shown) | |||
| Line 65: | Line 65: | ||
</syntaxhighlight> | </syntaxhighlight> | ||
| − | === Create a new branch | + | === Create a new branch === |
In the les_planet_workflow directory, do: | In the les_planet_workflow directory, do: | ||
| Line 71: | Line 71: | ||
git branch new_branch | git branch new_branch | ||
git checkout new_branch | git checkout new_branch | ||
| − | < | + | </syntaxhighlight> |
| − | Adapt 0_defining file to Titan. | + | === Adapt 0_defining file === |
| + | Some lines are specific to the cluster, for SPIRIT: | ||
| + | <syntaxhighlight lang="Bash"> | ||
| + | archname="ifort_MESOIPSL" | ||
| + | </syntaxhighlight> | ||
| + | |||
| + | Some lines are specific to Titan: | ||
| + | <syntaxhighlight lang="Bash"> | ||
| + | version=tags/titan_les_compiles_and_runs_master_MESOIPSL # titan | ||
| + | physics=titan | ||
| + | add="-d 32x48x55 -s 1 -b 23x23 -cpp OLD_COMPILO" # titan | ||
| + | </syntaxhighlight> | ||
| + | |||
| + | /!\ The "inputs to script configure" depend on the version of WRF you use. | ||
| − | Run install.sh | + | === Run install.sh === |
<syntaxhighlight lang="Bash"> | <syntaxhighlight lang="Bash"> | ||
./install.sh | ./install.sh | ||
| − | < | + | </syntaxhighlight> |
| + | |||
| + | == Run a simulation == | ||
| + | |||
| + | Go to a test directory, for instance: | ||
| + | <syntaxhighlight lang="Bash"> | ||
| + | cd titan_pbl | ||
| + | </syntaxhighlight> | ||
| + | |||
| + | Adapt the simulation parameters in namelist.input (e.g. the duration of the simulation). | ||
| + | |||
| + | Update the GCM data path: in callphys.def, set datadir to the same path as the datadir defined in physiq.def (e.g. /data/mlefevre/SIMU/filephys/TITAN/datagcm). | ||
| + | |||
| + | Then initialize and launch the simulation: | ||
| + | <syntaxhighlight lang="Bash"> | ||
| + | ./ideal.exe | ||
| + | ./wrf.exe | ||
| + | </syntaxhighlight> | ||
| + | |||
| + | [[Category:Titan-Mesoscale]] | ||
| + | [[Category:Titan-Model]] | ||
Latest revision as of 15:29, 5 January 2024
Contents
Install FCM
On your home, do:
mkdir TOOLS
cd TOOLS
svn checkout https://forge.ipsl.jussieu.fr/fcm/svn/PATCHED/FCM_V1.2
cd
vi .bash_profile
In your ~/.bash_profile, add:
export PATH=$PATH:$HOME/TOOLS/FCM_V1.2/bin
Configure your ~/.bashrc
In your ~/bashrc, add:
# Source global definitions
if [ -f /etc/bashrc ]; then
. /etc/bashrc
fi
# User specific aliases and functions
ulimit -s unlimited
declare -x PATH=./:$PATH
declare -x WRFIO_NCD_LARGE_FILE_SUPPORT=1
module purge
module load intel/2021.4.0
module load intel-mkl/2020.4.304
module load openmpi/4.0.7
module load hdf5/1.10.7-mpi
module load netcdf-fortran/4.5.3-mpi
module load netcdf-c/4.7.4-mpi
declare -x WHERE_MPI=/net/nfs/tools/u20/22.3/PrgEnv/intel/linux-ubuntu20.04-zen2/openmpi/4.0.7-intel-2021.4.0-43fdcnab3ydwu7ycrplnzlp6xieusuz7/bin/
declare -x NETCDF=/scratchu/spiga/les_mars_project_spirit/netcdf_hacks/SPIRIT
declare -x NCDFLIB=$NETCDF/lib
declare -x NCDFINC=$NETCDF/include
Add private key
If you don't have one already, you need to add a private key file on your home, that corresponds to the public key file you have on GitLab.
To do this, put your id_rsa file in the directory ~/.ssh/. Then, change the rights to the file, so that only you can access and read it:
chmod go-r ~./ssh/id_rsa
Install the code
Load les_planet_workflow from Git
On one of the scratch disks (e.g. scratchu), do:
git clone git@gitlab.in2p3.fr:aymeric.spiga/les_mars_project.git les_planet_workflow
Create a new branch
In the les_planet_workflow directory, do:
git branch new_branch
git checkout new_branch
Adapt 0_defining file
Some lines are specific to the cluster, for SPIRIT:
archname="ifort_MESOIPSL"
Some lines are specific to Titan:
version=tags/titan_les_compiles_and_runs_master_MESOIPSL # titan
physics=titan
add="-d 32x48x55 -s 1 -b 23x23 -cpp OLD_COMPILO" # titan
/!\ The "inputs to script configure" depend on the version of WRF you use.
Run install.sh
./install.sh
Run a simulation
Go to a test directory, for instance:
cd titan_pbl
Adapt the simulation parameters in namelist.input (e.g. the duration of the simulation).
Update the GCM data path: in callphys.def, set datadir to the same path as the datadir defined in physiq.def (e.g. /data/mlefevre/SIMU/filephys/TITAN/datagcm).
Then initialize and launch the simulation:
./ideal.exe
./wrf.exe
